4NRE The structure of human 15-lipoxygenase-2 with a substrate mimic date 2013-11-26
authors Kobe, M.J., Neau, D.B., Mitchell, C.E., Bartlett, S.G., Newcomer, M.E.
compound source
symmetry
R_factor
R_Free 0.2033
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.63
ligand C8E, CA, FE2, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of human 15-lipoxygenase-2 with a substrate mimic., Kobe MJ, Neau DB, Mitchell CE, Bartlett SG, Newcomer ME, J Biol Chem. 2014 Mar 21;289(12):8562-9. doi: 10.1074/jbc.M113.543777. Epub 2014 , Feb 4. PMID:24497644
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (346 Kb) [Save to disk]
  • Biological Unit Coordinates (4nre.pdb1.gz) 337 Kb
  • Biological Unit Coordinates (4nre.pdb2.gz) 2008 Kb
  • LPC: Ligand-Protein Contacts for 4NRE
  • CSU: Contacts of Structural Units for 4NRE
  • Structure Factors (628 Kb)
  • Retrieve 4NRE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NRE from S2C, [Save to disk]
  • Re-refined 4nre structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NRE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NRE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NRE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nre_A] [4nre]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NRE: [LH2 ] by SMART
  • Other resources with information on 4NRE
  • Community annotation for 4NRE at PDBWiki (http://pdbwiki.org)

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