4O22 Binary complex of metal-free PKAc with SP20. date
authors Das, A., Kovalevsky, A.Y., Gerlits, O., Langan, P., Heller, W.T., Keshwani, M., Taylor, S.S.
compound source
symmetry
R_factor
R_Free 0.2192
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


S


Primary referenceMetal-Free cAMP-Dependent Protein Kinase Can Catalyze Phosphoryl Transfer., Gerlits O, Das A, Keshwani MM, Taylor S, Waltman MJ, Langan P, Heller WT, Kovalevsky A, Biochemistry. 2014 May 20;53(19):3179-86. doi: 10.1021/bi5000965. Epub 2014 May, 8. PMID:24786636
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (4o22.pdb1.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 4O22
  • CSU: Contacts of Structural Units for 4O22
  • Structure Factors (1280 Kb)
  • Retrieve 4O22 in mmCIF format [Save to disk]
  • Re-refined 4o22 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4O22 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4O22
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O22, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o22_A] [4o22] [4o22_S]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4O22: [S_TK_X] [S_TKc ] by SMART
    • Other resources with information on 4O22
  • Community annotation for 4O22 at PDBWiki (http://pdbwiki.org)

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