4O4P Structure of P450 BM3 A82F F87V in complex with S-omeprazol date 2013-12-19
authors Leys, D.
compound source
symmetry
R_factor
R_Free 0.22140
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.83
ligand 1C6, HEM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHuman P450-like oxidation of diverse proton pump inhibitor drugs by 'gatekeeper' mutants of flavocytochrome P450 BM3., Butler CF, Peet C, McLean KJ, Baynham MT, Blankley RT, Fisher K, Rigby SE, Leys D, Voice MW, Munro AW, Biochem J. 2014 Jun 1;460(2):247-59. doi: 10.1042/BJ20140030. PMID:24588219
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk]
  • Biological Unit Coordinates (4o4p.pdb1.gz) 82 Kb
  • Biological Unit Coordinates (4o4p.pdb2.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 4O4P
  • CSU: Contacts of Structural Units for 4O4P
  • Structure Factors (1924 Kb)
  • Retrieve 4O4P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O4P from S2C, [Save to disk]
  • Re-refined 4o4p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4O4P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4O4P
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O4P, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o4p_B] [4o4p_A] [4o4p]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4O4P
  • Community annotation for 4O4P at PDBWiki (http://pdbwiki.org)

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