4O91 Crystal Structure of type II inhibitor NG25 bound to TAK1-TAB1 date
authors Gurbani, D., Hunter, J.C., Tan, L., Westover, K.D.
compound source
symmetry
R_factor
R_Free 0.2073
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.39
ligand NG2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of Type II Inhibitors of TGFbeta-Activated Kinase 1 (TAK1) and Mitogen-Activated Protein Kinase Kinase Kinase Kinase 2 (MAP4K2)., Tan L, Nomanbhoy T, Gurbani D, Patricelli M, Hunter J, Geng J, Herhaus L, Zhang J, Pauls E, Ham Y, Choi HG, Xie T, Deng X, Buhrlage SJ, Sim T, Cohen P, Sapkota G, Westover KD, Gray NS, J Med Chem. 2014 Jul 30. PMID:25075558
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (4o91.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (4o91.pdb2.gz) 198 Kb
  • LPC: Ligand-Protein Contacts for 4O91
  • CSU: Contacts of Structural Units for 4O91
  • Structure Factors (383 Kb)
  • Retrieve 4O91 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O91 from S2C, [Save to disk]
  • Re-refined 4o91 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4O91 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4O91
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O91, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o91_A] [4o91]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4O91: [STYKc ] by SMART
    • Other resources with information on 4O91
  • Community annotation for 4O91 at PDBWiki (http://pdbwiki.org)

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