4OM5 Crystal structure of CTX A4 from Taiwan Cobra (Naja naja atra) date
authors Lin, C.C., Chang, C.I., Wu, W.G.
compound source
symmetry
R_factor
R_Free 0.26235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.55
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • protein kinase inhibitor act...
  • toxin activity


  • Primary referenceEndocytotic Routes of Cobra Cardiotoxins Depend on the Spatial Distribution of Positively Charged and Hydrophobic Domains to Target Distinct Types of Sulfated Glycoconjugates on Cell Surface., Lee SC, Lin CC, Wang CH, Wu PL, Huang HW, Chang CI, Wu WG, J Biol Chem. 2014 Jun 4. pii: jbc.M114.557157. PMID:24898246
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (4om5.pdb1.gz) 81 Kb
  • CSU: Contacts of Structural Units for 4OM5
  • Structure Factors (217 Kb)
  • Retrieve 4OM5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OM5 from S2C, [Save to disk]
  • Re-refined 4om5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4OM5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4OM5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OM5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4om5_C] [4om5_D] [4om5_A] [4om5] [4om5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4OM5
  • Community annotation for 4OM5 at PDBWiki (http://pdbwiki.org)

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