4ON3 Crystal structure of human sorting nexin 10 (SNX10) date
authors Xu, T., Xu, J., Wang, Q., Liu, J.
compound source
symmetry
R_factor
R_Free 0.22912
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand 1PE, NA, NO3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of human SNX10 reveals insights into its role in human autosomal recessive osteopetrosis., Xu T, Xu J, Ye Y, Wang Q, Shu X, Pei D, Liu J, Proteins. 2014 Dec;82(12):3483-9. doi: 10.1002/prot.24689. Epub 2014 Oct 1. PMID:25212774
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (4on3.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 4ON3
  • CSU: Contacts of Structural Units for 4ON3
  • Structure Factors (1651 Kb)
  • Retrieve 4ON3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ON3 from S2C, [Save to disk]
  • Re-refined 4on3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ON3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ON3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ON3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4on3] [4on3_B] [4on3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ON3: [PX ] by SMART
  • Other resources with information on 4ON3
  • Community annotation for 4ON3 at PDBWiki (http://pdbwiki.org)

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