4ORS Three-dimensional structure of the C65A mutant of Human lipocalin-type Prostaglandin D Synthase apo-form date
authors Perduca, M., Bovi, M., Bertinelli, M., Bertini, E., Destefanis, L., Carrizo, M.E., Capaldi, S., Monaco, H.L.
compound source
symmetry
R_factor
R_Free 0.2799
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceHigh-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase., Perduca M, Bovi M, Bertinelli M, Bertini E, Destefanis L, Carrizo ME, Capaldi S, Monaco HL, Acta Crystallogr D Biol Crystallogr. 2014 Aug 1;70(Pt 8):2125-38. doi:, 10.1107/S1399004714012462. Epub 2014 Jul 25. PMID:25084332
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (4ors.pdb1.gz) 53 Kb
  • Biological Unit Coordinates (4ors.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (4ors.pdb3.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 4ORS
  • CSU: Contacts of Structural Units for 4ORS
  • Structure Factors (1902 Kb)
  • Retrieve 4ORS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ORS from S2C, [Save to disk]
  • Re-refined 4ors structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ORS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ORS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ORS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ors_A] [4ors_B] [4ors]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ORS
  • Community annotation for 4ORS at PDBWiki (http://pdbwiki.org)

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