4PKI Complex of ATP-actin With the C-terminal Actin-Binding Domain of Tropomodulin date
authors Rao, J.N., Dominguez, R.
compound source
symmetry
R_factor
R_Free 0.2005
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand ATP, CA, HIC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


G


Primary referenceActin cytoskeleton. Mechanism of actin filament pointed-end capping by tropomodulin., Rao JN, Madasu Y, Dominguez R, Science. 2014 Jul 25;345(6195):463-7. doi: 10.1126/science.1256159. PMID:25061212
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (337 Kb) [Save to disk]
  • Biological Unit Coordinates (4pki.pdb1.gz) 329 Kb
  • LPC: Ligand-Protein Contacts for 4PKI
  • CSU: Contacts of Structural Units for 4PKI
  • Structure Factors (742 Kb)
  • Retrieve 4PKI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PKI from S2C, [Save to disk]
  • Re-refined 4pki structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4PKI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4PKI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PKI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pki_A] [4pki] [4pki_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4PKI: [ACTIN] [GEL ] by SMART
    • Other resources with information on 4PKI
  • Community annotation for 4PKI at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science