4PV1	Cytochrome B6F structure from M. laminosus with the quinone analog inhibitor stigmatellin	date
authors	Hasan, S.S., Yamashita, E., Cramer, W.A.
compound		source
symmetry		R_factor R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.00
ligand	7PH, 8K6, BCR, CD, CLA, FES, HEC, MYS, OPC, SMA, SQD, UMQ	enzyme
Gene Ontology	Chain Function Process Component A B C electron transfer activity D electron transporter, transf... E electron transfer activity electron transporter, transf... F electron transfer activity G electron transporter, transf... H electron transfer activity electron transporter, transf...
Primary reference	Traffic within the cytochrome b6f lipoprotein complex: gating of the quinone portal., Hasan SS, Proctor EA, Yamashita E, Dokholyan NV, Cramer WA, Biophys J. 2014 Oct 7;107(7):1620-8. doi: 10.1016/j.bpj.2014.08.003. PMID:25296314

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (352 Kb) [Save to disk] Biological Unit Coordinates (4pv1.pdb1.gz) 651 Kb LPC: Ligand-Protein Contacts for 4PV1 CSU: Contacts of Structural Units for 4PV1 Structure Factors (761 Kb) Retrieve 4PV1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4PV1 from S2C, [Save to disk] Re-refined 4pv1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4PV1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4PV1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4PV1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4pv1] [4pv1_H] [4pv1_C] [4pv1_F] [4pv1_A] [4pv1_B] [4pv1_G] [4pv1_E] [4pv1_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4PV1

Community annotation for 4PV1 at PDBWiki (http://pdbwiki.org)

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