4PWQ HIGH-RESOLUTION CRYSTAL STRUCTURE OF THE E1-DOMAIN of THE AMYLOID PRECURSOR PROTEIN date
authors Hoefgen, S., Dahms, S.O., Than, M.E.
compound source
symmetry
R_factor
R_Free 0.185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe Amyloid Precursor Protein Shows a pH-Dependent Conformational Switch in Its E1 Domain., Hoefgen S, Dahms SO, Oertwig K, Than ME, J Mol Biol. 2015 Jan 30;427(2):433-42. doi: 10.1016/j.jmb.2014.12.005. Epub 2014 , Dec 17. PMID:25528641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (4pwq.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (4pwq.pdb2.gz) 31 Kb
  • CSU: Contacts of Structural Units for 4PWQ
  • Structure Factors (418 Kb)
  • Retrieve 4PWQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PWQ from S2C, [Save to disk]
  • Re-refined 4pwq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PWQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4PWQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PWQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pwq] [4pwq_A] [4pwq_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4PWQ: [A4_EXTRA ] by SMART
  • Other resources with information on 4PWQ
  • Community annotation for 4PWQ at PDBWiki (http://pdbwiki.org)

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