4QMG The Structure of MTDH-SND1 Complex Reveals Novel Cancer-Promoting Interactions date
authors Guo, F., Stanevich, V., Wan, L., Satyshur, K., Kang, Y., Xing, Y.
compound source
symmetry
R_factor
R_Free 0.2476
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand CS, GOL, MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceStructural Insights into the Tumor-Promoting Function of the MTDH-SND1 Complex., Guo F, Wan L, Zheng A, Stanevich V, Wei Y, Satyshur KA, Shen M, Lee W, Kang Y, Xing Y, Cell Rep. 2014 Sep 25;8(6):1704-13. doi: 10.1016/j.celrep.2014.08.033. Epub 2014 , Sep 18. PMID:25242325
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (553 Kb) [Save to disk]
  • Biological Unit Coordinates (4qmg.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (4qmg.pdb2.gz) 114 Kb
  • Biological Unit Coordinates (4qmg.pdb3.gz) 113 Kb
  • Biological Unit Coordinates (4qmg.pdb4.gz) 113 Kb
  • Biological Unit Coordinates (4qmg.pdb5.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 4QMG
  • CSU: Contacts of Structural Units for 4QMG
  • Structure Factors (1426 Kb)
  • Retrieve 4QMG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QMG from S2C, [Save to disk]
  • Re-refined 4qmg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QMG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QMG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QMG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qmg_J] [4qmg_D] [4qmg_H] [4qmg_G] [4qmg_E] [4qmg_I] [4qmg_C] [4qmg_A] [4qmg] [4qmg_F] [4qmg_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QMG: [SNc ] by SMART
    • Other resources with information on 4QMG
  • Community annotation for 4QMG at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science