4QRS Crystal Structure of HLA B*0801 in complex with ELK_IYM, ELKRKMIYM date
authors Gras, S., Twist, K.A., Rossjohn, J.
compound source
symmetry
R_factor
R_Free 0.2159
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand ACT enzyme
Gene
Ontology
ChainFunctionProcessComponent
B
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    • Primary referenceMolecular imprint of exposure to naturally occurring genetic variants of human cytomegalovirus on the T cell repertoire., Smith C, Gras S, Brennan RM, Bird NL, Valkenburg SA, Twist KA, Burrows JM, Miles JJ, Chambers D, Bell S, Campbell S, Kedzierska K, Burrows SR, Rossjohn J, Khanna R, Sci Rep. 2014 Feb 10;4:3993. doi: 10.1038/srep03993. PMID:24509977
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk]
  • Biological Unit Coordinates (4qrs.pdb1.gz) 81 Kb
  • LPC: Ligand-Protein Contacts for 4QRS
  • CSU: Contacts of Structural Units for 4QRS
  • Structure Factors (1524 Kb)
  • Retrieve 4QRS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QRS from S2C, [Save to disk]
  • Re-refined 4qrs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QRS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QRS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QRS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qrs] [4qrs_C] [4qrs_A] [4qrs_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QRS: [IGc1 ] by SMART
    • Other resources with information on 4QRS
  • Community annotation for 4QRS at PDBWiki (http://pdbwiki.org)

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