4R5A A Carbonic Anhydrase IX Mimic in Complex with a Carbohydrate-Based Sulfamate date
authors Mahon, B.P., McKenna, R.
compound source
symmetry
R_factor
R_Free 0.185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.64
ligand 3J4, ALY, GOL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Insights into Carbonic Anhydrase IX Isoform Specificity of Carbohydrate-Based Sulfamates., Moeker J, Mahon BP, Bornaghi LF, Vullo D, Supuran CT, McKenna R, Poulsen SA, J Med Chem. 2014 Oct 8. PMID:25254302
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (4r5a.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 4R5A
  • CSU: Contacts of Structural Units for 4R5A
  • Structure Factors (451 Kb)
  • Retrieve 4R5A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4R5A from S2C, [Save to disk]
  • Re-refined 4r5a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4R5A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4R5A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4R5A, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4r5a_A] [4r5a]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4R5A: [Carb_anhydrase ] by SMART
  • Other resources with information on 4R5A
  • Community annotation for 4R5A at PDBWiki (http://pdbwiki.org)

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