4RJ9	Structure of a plant specific C2 domain protein, OsGAP1 from rice	date
authors	Miao, R., Fong, Y.H., Wong, K.B., Lam, H.M.
compound		source
symmetry		R_factor R_Free 0.2039
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.63
ligand	K	enzyme
Gene	OSJ
Gene Ontology	Chain Function Process Component A
Primary reference	Site-Directed Mutagenesis Shows the Significance of Interactions with Phospholipids and the G-protein OsYchF1 on the Physiological Functions of the Rice GTPase-Activating Protein 1 (OsGAP1)., Yung YL, Cheung MY, Miao R, Fong YH, Li KP, Yu MH, Chye ML, Wong KB, Lam HM, J Biol Chem. 2015 Aug 18. pii: jbc.M115.655639. PMID:26286751

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (4rj9.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 4RJ9 CSU: Contacts of Structural Units for 4RJ9 Structure Factors (437 Kb) Retrieve 4RJ9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4RJ9 from S2C, [Save to disk] Re-refined 4rj9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4RJ9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4RJ9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4rj9_A] [4rj9] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4RJ9: [C2 ] by SMART

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