4RYI Crystal structure of BcTSPO/PK11195 complex date
authors Guo, Y., Liu, Q., Hendrickson, W.A., NYCOMPS, New.York.Consortium.on.Membrane.Protein.Structure.
compound source
symmetry
R_factor
R_Free 0.3137
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.49
ligand PKA enzyme
Gene BC
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceProtein structure. Structure and activity of tryptophan-rich TSPO proteins., Guo Y, Kalathur RC, Liu Q, Kloss B, Bruni R, Ginter C, Kloppmann E, Rost B, Hendrickson WA, Science. 2015 Jan 30;347(6221):551-5. doi: 10.1126/science.aaa1534. PMID:25635100
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (4ryi.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (4ryi.pdb2.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 4RYI
  • CSU: Contacts of Structural Units for 4RYI
  • Structure Factors (70 Kb)
  • Retrieve 4RYI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RYI from S2C, [Save to disk]
  • Re-refined 4ryi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4RYI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4RYI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4RYI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ryi] [4ryi_B] [4ryi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4RYI
  • Community annotation for 4RYI at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science