4S10 Gelsolin nanobody shielding mutant plasma gelsolin from furin proteolysis date
authors Wongsantichon, J., Robinson, R.C., Gettemans, J.
compound source
symmetry
R_factor
R_Free 0.3125
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.61
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, C


Primary referenceAn ER-directed gelsolin nanobody targets the first step in amyloid formation in a gelsolin amyloidosis mouse model., Van Overbeke W, Wongsantichon J, Everaert I, Verhelle A, Zwaenepoel O, Loonchanta A, Burtnick LD, De Ganck A, Hochepied T, Haigh J, Cuvelier C, Derave W, Robinson RC, Gettemans J, Hum Mol Genet. 2015 May 1;24(9):2492-507. doi: 10.1093/hmg/ddv010. Epub 2015 Jan , 18. PMID:25601851
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (4s10.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (4s10.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 4S10
  • CSU: Contacts of Structural Units for 4S10
  • Structure Factors (224 Kb)
  • Retrieve 4S10 in mmCIF format [Save to disk]
  • Re-refined 4s10 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4S10 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4S10
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4S10, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4s10] [4s10_B] [4s10_C] [4s10_A] [4s10_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4S10: [GEL] [IGv ] by SMART
    • Other resources with information on 4S10
  • Community annotation for 4S10 at PDBWiki (http://pdbwiki.org)

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