4TGF Growth Factor date Jun 13, 1990
title Solution Structures Of Human Transforming Growth Factor Alph From 1h Nmr Data
authors T.P.Kline, F.K.Brown, S.C.Brown, P.W.Jeffs, K.D.Kopple, L.Mueller
compound source
Molecule: Des-Val-1,Val-2,Transforming Growth Factor, Alpha
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
related structures by homologous chain: 3TGF
Primary referenceSolution structures of human transforming growth factor alpha derived from 1H NMR data., Kline TP, Brown FK, Brown SC, Jeffs PW, Kopple KD, Mueller L, Biochemistry 1990 Aug 28;29(34):7805-13. PMID:2261437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (4tgf.pdb1.gz) 13 Kb
  • CSU: Contacts of Structural Units for 4TGF
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 4TGF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TGF from S2C, [Save to disk]
    • View 4TGF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TGF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TGF, from MSDmotif at EBI
  • Genome occurence of 4TGF's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d4tgf__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tgf] [4tgf_A]
  • SWISS-PROT database: [P01135]
  • Domain organization of [TGFA_HUMAN] by SWISSPFAM
  • Domain found in 4TGF: [EGF ] by SMART
    • Other resources with information on 4TGF
  • Community annotation for 4TGF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 4TGF from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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