4U0B Hexamer HIV-1 CA in complex with CPSF6 peptide, P212121 crystal form date
authors Price, A.J., Jacques, D.A., James, L.C.
compound source
symmetry
R_factor
R_Free 0.2619
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceHost Cofactors and Pharmacologic Ligands Share an Essential Interface in HIV-1 Capsid That Is Lost upon Disassembly., Price AJ, Jacques DA, McEwan WA, Fletcher AJ, Essig S, Chin JW, Halambage UD, Aiken C, James LC, PLoS Pathog. 2014 Oct 30;10(10):e1004459. doi: 10.1371/journal.ppat.1004459., eCollection 2014 Oct. PMID:25356722
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (843 Kb) [Save to disk]
  • Biological Unit Coordinates (4u0b.pdb1.gz) 418 Kb
  • Biological Unit Coordinates (4u0b.pdb2.gz) 419 Kb
  • CSU: Contacts of Structural Units for 4U0B
  • Structure Factors (4770 Kb)
  • Retrieve 4U0B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U0B from S2C, [Save to disk]
  • Re-refined 4u0b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4U0B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4U0B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U0B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u0b_W] [4u0b_U] [4u0b_A] [4u0b_G] [4u0b_H] [4u0b_Q] [4u0b_O] [4u0b_B] [4u0b_K] [4u0b_P] [4u0b_J] [4u0b_X] [4u0b_L] [4u0b_E] [4u0b_D] [4u0b_S] [4u0b_I] [4u0b_M] [4u0b_F] [4u0b_R] [4u0b_V] [4u0b] [4u0b_C] [4u0b_T] [4u0b_N]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4U0B
  • Community annotation for 4U0B at PDBWiki (http://pdbwiki.org)

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