4U4T Structure of a nitrate/nitrite antiporter NarK in nitrate-bound inward-open state date
authors Fukuda, M., Takeda, H., Kato, H.E., Doki, S., Ito, K., Maturana, A.D., Ishitani, R., Nureki, O.
compound source
symmetry
R_factor
R_Free 0.2475
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand NO3, OLA, OLC, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for dynamic mechanism of nitrate/nitrite antiport by NarK., Fukuda M, Takeda H, Kato HE, Doki S, Ito K, Maturana AD, Ishitani R, Nureki O, Nat Commun. 2015 May 11;6:7097. doi: 10.1038/ncomms8097. PMID:25959928
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (4u4t.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 4U4T
  • CSU: Contacts of Structural Units for 4U4T
  • Structure Factors (175 Kb)
  • Retrieve 4U4T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U4T from S2C, [Save to disk]
  • Re-refined 4u4t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
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  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u4t_A] [4u4t]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4U4T
  • Community annotation for 4U4T at PDBWiki (http://pdbwiki.org)

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