4URV The crystal structure of H-Ras and SOS in complex with ligands date
authors Winter, J.J.G., Anderson, M., Blades, K., Brassington, C., Breeze, A.L., Chresta, C., Embrey, K., Fairley, G., Faulder, P., Finlay, M.R.V., Kettle, J.G., Nowak, T., Overman, R., Patel, S.J., Perkins, P., Spadola, L., Tart, J., Tucker, J., Wrigley, G.
compound source
symmetry
R_factor
R_Free 0.2318
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.58
ligand FMT, UMK enzyme
Gene
Ontology
ChainFunctionProcessComponent
R


S


Primary referenceSmall Molecule Binding Sites on the Ras:SOS Complex Can Be Exploited for Inhibition of Ras Activation., Winter JJ, Anderson M, Blades K, Brassington C, Breeze AL, Chresta C, Embrey K, Fairley G, Faulder P, Finlay MR, Kettle JG, Nowak T, Overman R, Patel SJ, Perkins P, Spadola L, Tart J, Tucker JA, Wrigley G, J Med Chem. 2015 Feb 26. PMID:25695162
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (4urv.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 4URV
  • CSU: Contacts of Structural Units for 4URV
  • Structure Factors (647 Kb)
  • Retrieve 4URV in mmCIF format [Save to disk]
  • Re-refined 4urv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4URV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4URV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4URV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4urv_S] [4urv] [4urv_R]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4URV: [RAS] [RasGEF] [RasGEFN ] by SMART
  • Other resources with information on 4URV
  • Community annotation for 4URV at PDBWiki (http://pdbwiki.org)

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