3J7Q Ribosome date 4-0 20, 2000
authors R.M.Voorhees, I.S.Fernandez, S.H.W.Scheres, R.S.Hegde
compound source
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method X-Ray Diffractionresolution
note 3J7Q supersedes 4W24, 4W25, 1VWY, 1VWZ, 3J72
Gene
Ontology
ChainFunctionProcessComponent
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Primary referenceStructure of the Mammalian ribosome-sec61 complex to 3.4 a resolution., Voorhees RM, Fernandez IS, Scheres SH, Hegde RS, Cell. 2014 Jun 19;157(7):1632-43. doi: 10.1016/j.cell.2014.05.024. Epub 2014 Jun , 12. PMID:24930395
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1923 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 3J7Q
  • Retrieve 3J7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3J7Q from S2C, [Save to disk]
  • View 3J7Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3J7Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3j7q_G] [3j7q_m] [3j7q] [3j7q_l] [3j7q_7] [3j7q_Z] [3j7q_M] [3j7q_a] [3j7q_o] [3j7q_J] [3j7q_d] [3j7q_L] [3j7q_k] [3j7q_S] [3j7q_r] [3j7q_I] [3j7q_T] [3j7q_j] [3j7q_3] [3j7q_8] [3j7q_2] [3j7q_C] [3j7q_e] [3j7q_F] [3j7q_U] [3j7q_i] [3j7q_O] [3j7q_H] [3j7q_A] [3j7q_R] [3j7q_V] [3j7q_X] [3j7q_E] [3j7q_f] [3j7q_b] [3j7q_N] [3j7q_c] [3j7q_p] [3j7q_5] [3j7q_Q] [3j7q_P] [3j7q_D] [3j7q_1] [3j7q_B] [3j7q_g] [3j7q_W] [3j7q_n] [3j7q_h] [3j7q_Y]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3J7Q: [KOW] [Ribosomal_L14] [Ribosomal_L15e] [Ribosomal_L19e] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_L31e] [Ribosomal_L32e] [Ribosomal_L40e] [TRASH] [UBQ ] by SMART
  • Other resources with information on 3J7Q
  • Community annotation for 3J7Q at PDBWiki (http://pdbwiki.org)

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