4W6V Crystal structure of a peptide transporter from Yersinia enterocolitica at 3 A resolution date
authors Jeckelmann, J.M., Boggavarapu, R., Harder, D., Ucurum, Z., Fotiadis, D.
compound source
symmetry
R_factor
R_Free 0.2940
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.02
Gene YEP4
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRole of electrostatic interactions for ligand recognition and specificity of peptide transporters., Boggavarapu R, Jeckelmann JM, Harder D, Ucurum Z, Fotiadis D, BMC Biol. 2015 Aug 6;13(1):58. doi: 10.1186/s12915-015-0167-8. PMID:26246134
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (4w6v.pdb1.gz) 74 Kb
  • CSU: Contacts of Structural Units for 4W6V
  • Structure Factors (263 Kb)
  • Retrieve 4W6V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4W6V from S2C, [Save to disk]
  • Re-refined 4w6v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4W6V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4W6V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4w6v_A] [4w6v]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4W6V
  • Community annotation for 4W6V at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science