4WIJ HUMAN SPLICING FACTOR, CONSTRUCT 1 date
authors lee, M., bond, c.s.
compound source
symmetry
R_factor
R_Free 0.335
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.49
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe structure of human SFPQ reveals a coiled-coil mediated polymer essential for functional aggregation in gene regulation., Lee M, Sadowska A, Bekere I, Ho D, Gully BS, Lu Y, Iyer KS, Trewhella J, Fox AH, Bond CS, Nucleic Acids Res. 2015 Mar 12. pii: gkv156. PMID:25765647
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (4wij.pdb1.gz) 100 Kb
  • CSU: Contacts of Structural Units for 4WIJ
  • Structure Factors (696 Kb)
  • Retrieve 4WIJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WIJ from S2C, [Save to disk]
  • Re-refined 4wij structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WIJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WIJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WIJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wij_A] [4wij_B] [4wij]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WIJ: [RRM ] by SMART
  • Other resources with information on 4WIJ
  • Community annotation for 4WIJ at PDBWiki (http://pdbwiki.org)

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