4WT2 Co-crystal Structure of MDM2 in Complex with AM-7209 date
authors Shaffer, P.L., Huang, X., Yakowec, P., Long, A.M.
compound source
symmetry
R_factor
R_Free 0.1919
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.42
ligand 3UD, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of AM-7209, a Potent and Selective 4-Amidobenzoic Acid Inhibitor of the MDM2-p53 Interaction., Rew Y, Sun D, Yan X, Beck HP, Canon J, Ada C, Duquette J, Eksterowicz J, Fox BM, Fu J, Gonzalez AZ, Houze JB, Huang X, Jiang B, Jin L, Li Y, Li Z, Ling Y, Lo MC, Long AM, McGee LR, McIntosh J, Oliner J, Osgood T, Saiki A, Shaffer P, Wortman S, Yakowec P, Ye Q, Yu D, Medina JC, Olson SH, J Med Chem. 2014 Nov 10. PMID:25384157
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (4wt2.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 4WT2
  • CSU: Contacts of Structural Units for 4WT2
  • Structure Factors (526 Kb)
  • Retrieve 4WT2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WT2 from S2C, [Save to disk]
  • Re-refined 4wt2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WT2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WT2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WT2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wt2] [4wt2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4WT2
  • Community annotation for 4WT2 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science