4WY4 Crystal structure of autophagic SNARE complex date
authors Zhao, M., Brunger, A.T.
compound source
symmetry
R_factor
R_Free 0.1768
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceATG14 promotes membrane tethering and fusion of autophagosomes to endolysosomes., Diao J, Liu R, Rong Y, Zhao M, Zhang J, Lai Y, Zhou Q, Wilz LM, Li J, Vivona S, Pfuetzner RA, Brunger AT, Zhong Q, Nature. 2015 Feb 9. doi: 10.1038/nature14147. PMID:25686604
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (4wy4.pdb1.gz) 104 Kb
  • CSU: Contacts of Structural Units for 4WY4
  • Structure Factors (508 Kb)
  • Retrieve 4WY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WY4 from S2C, [Save to disk]
  • Re-refined 4wy4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WY4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WY4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WY4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wy4_D] [4wy4_A] [4wy4] [4wy4_C] [4wy4_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WY4: [t_SNARE ] by SMART
  • Other resources with information on 4WY4
  • Community annotation for 4WY4 at PDBWiki (http://pdbwiki.org)

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