4X61	Crystal structure of PRMT5:MEP50 with EPZ015666 and SAM	date
authors	Boriack-Sjodin, P.A.
compound		source
symmetry		R_factor R_Free 0.2603
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.85
ligand	3XV, GOL, SAM	enzyme
Gene Ontology	Chain Function Process Component A transcription corepressor ac... protein-arginine omega-N sym... B ligand-dependent nuclear rec...
Primary reference	A selective inhibitor of PRMT5 with in vivo and in vitro potency in MCL models., Chan-Penebre E, Kuplast KG, Majer CR, Boriack-Sjodin PA, Wigle TJ, Johnston LD, Rioux N, Munchhof MJ, Jin L, Jacques SL, West KA, Lingaraj T, Stickland K, Ribich SA, Raimondi A, Scott MP, Waters NJ, Pollock RM, Smith JJ, Barbash O, Pappalardi M, Ho TF, Nurse K, Oza KP, Gallagher KT, Kruger R, Moyer MP, Copeland RA, Chesworth R, Duncan KW, Nat Chem Biol. 2015 Apr 27. doi: 10.1038/nchembio.1810. PMID:25915199

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk] Biological Unit Coordinates (4x61.pdb1.gz) 151 Kb LPC: Ligand-Protein Contacts for 4X61 CSU: Contacts of Structural Units for 4X61 Structure Factors (548 Kb) Retrieve 4X61 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4X61 from S2C, [Save to disk] Re-refined 4x61 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4X61 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4X61

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4X61, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4x61_B] [4x61_A] [4x61] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4X61: [WD40 ] by SMART

Other resources with information on 4X61

Community annotation for 4X61 at PDBWiki (http://pdbwiki.org)

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