4XBU In vitro Crystal Structure of PAK4 in complex with Inka peptide date
authors Baskaran, Y., Ang, K.C., Anekal, P.V., Chan, W.L., Grimes, J.M., Manser, E., Robinson, R.C.
compound source
symmetry
R_factor
R_Free 0.24343
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.06
ligand SEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceAn in cellulo-derived structure of PAK4 in complex with its inhibitor Inka1., Baskaran Y, Ang KC, Anekal PV, Chan WL, Grimes JM, Manser E, Robinson RC, Nat Commun. 2015 Nov 26;6:8681. doi: 10.1038/ncomms9681. PMID:26607847
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4xbu.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 4XBU
  • CSU: Contacts of Structural Units for 4XBU
  • Structure Factors (255 Kb)
  • Retrieve 4XBU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XBU from S2C, [Save to disk]
  • Re-refined 4xbu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4XBU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4XBU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xbu_A] [4xbu_B] [4xbu]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4XBU: [S_TKc ] by SMART
    • Other resources with information on 4XBU
  • Community annotation for 4XBU at PDBWiki (http://pdbwiki.org)

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