4XVR H-Ras Y137F date
authors Johnson, C.W., Mattos, C.
compound source
symmetry
R_factor
R_Free 0.2857
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.03
ligand CA, GNP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTyrosine phosphorylation of RAS by ABL allosterically enhances effector binding., Ting PY, Johnson CW, Fang C, Cao X, Graeber TG, Mattos C, Colicelli J, FASEB J. 2015 May 21. pii: fj.15-271510. PMID:25999467
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (4xvr.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 4XVR
  • CSU: Contacts of Structural Units for 4XVR
  • Structure Factors (79 Kb)
  • Retrieve 4XVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XVR from S2C, [Save to disk]
  • Re-refined 4xvr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XVR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XVR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xvr_A] [4xvr]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4XVR: [RAS ] by SMART
  • Other resources with information on 4XVR
  • Community annotation for 4XVR at PDBWiki (http://pdbwiki.org)

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