4XX1 Low resolution structure of LCAT in complex with Fab1 date
authors Piper, D.E., Walker, N.P.C., Romanow, W.G., Thibault, S.T.
compound source
symmetry
R_factor
R_Free 0.2800
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.60
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, J, B


Primary referenceThe high resolution crystal structure of human LCAT., Piper DE, Romanow WG, Gunawardane RN, Fordstrom P, Masterman S, Pan O, Thibault ST, Zhang R, Meininger D, Schwarz M, Wang Z, King C, Zhou M, Walker NP, J Lipid Res. 2015 Jul 20. pii: jlr.M059873. PMID:26195816
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (353 Kb) [Save to disk]
  • Biological Unit Coordinates (4xx1.pdb1.gz) 129 Kb
  • Biological Unit Coordinates (4xx1.pdb2.gz) 130 Kb
  • Biological Unit Coordinates (4xx1.pdb3.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 4XX1
  • CSU: Contacts of Structural Units for 4XX1
  • Structure Factors (2050 Kb)
  • Retrieve 4XX1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XX1 from S2C, [Save to disk]
  • Re-refined 4xx1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XX1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XX1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xx1_E] [4xx1_M] [4xx1] [4xx1_A] [4xx1_G] [4xx1_J] [4xx1_L] [4xx1_B] [4xx1_H] [4xx1_O]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4XX1: [IG_like] [IGv ] by SMART
  • Other resources with information on 4XX1
  • Community annotation for 4XX1 at PDBWiki (http://pdbwiki.org)

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