4Y72 Human CDK1/CyclinB1/CKS2 With Inhibitor date
authors Brown, N.R., Korolchuk, S., Martin, M.P., Stanley, W., Moukhametzianov, R., Noble, M.E.M., Endicott, J.A.
compound source
symmetry
R_factor
R_Free 0.2519
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand LZ9 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • virus receptor activity
  • histone kinase activity


    • C


    Primary referenceCDK1 structures reveal conserved and unique features of the essential cell cycle CDK., Brown NR, Korolchuk S, Martin MP, Stanley WA, Moukhametzianov R, Noble ME, Endicott JA, Nat Commun. 2015 Apr 13;6:6769. doi: 10.1038/ncomms7769. PMID:25864384
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk]
  • Biological Unit Coordinates (4y72.pdb1.gz) 220 Kb
  • LPC: Ligand-Protein Contacts for 4Y72
  • CSU: Contacts of Structural Units for 4Y72
  • Structure Factors (280 Kb)
  • Retrieve 4Y72 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y72 from S2C, [Save to disk]
  • Re-refined 4y72 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Y72 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4Y72
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y72_A] [4y72] [4y72_C] [4y72_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4Y72: [CKS] [CYCLIN] [Cyclin_C] [S_TKc ] by SMART
    • Other resources with information on 4Y72
  • Community annotation for 4Y72 at PDBWiki (http://pdbwiki.org)

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