4Y7I Crystal Structure of MTMR8 date
authors Yoo, K., Lee, J., Son, J., Shin, W., Im, D., Heo, Y.S.
compound source
symmetry
R_factor
R_Free 0.2467
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the catalytic phosphatase domain of MTMR8: implications for dimerization, membrane association and reversible oxidation., Yoo KY, Son JY, Lee JU, Shin W, Im DW, Kim SJ, Ryu SE, Heo YS, Acta Crystallogr D Biol Crystallogr. 2015 Jul 1;71(Pt 7):1528-39. doi:, 10.1107/S139900471500927X. Epub 2015 Jun 30. PMID:26143924
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]
  • Biological Unit Coordinates (4y7i.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 4Y7I
  • CSU: Contacts of Structural Units for 4Y7I
  • Structure Factors (386 Kb)
  • Retrieve 4Y7I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y7I from S2C, [Save to disk]
  • Re-refined 4y7i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Y7I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Y7I
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y7i_B] [4y7i] [4y7i_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4Y7I: [PTPc_DSPc ] by SMART
  • Other resources with information on 4Y7I
  • Community annotation for 4Y7I at PDBWiki (http://pdbwiki.org)

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