4YAY XFEL structure of human Angiotensin Receptor date
authors Zhang, H., Unal, H., Gati, C., Han, G.W., Zatsepin, N.A., James, D., Wang, D., Nelson, G., Weierstall, U., Messerschmidt, M., Williams, G.J., Boutet, S., Yefanov, O.M., White, T.A., Liu, W., Ishchenko, A., Tirupula, K.C., Desnoyer, R., Sawaya, M.C., Xu, Q., Coe, J., Cornrad, C.E., Fromme, P., Stevens, R.C., Katritch, V., Karnik, S.S., Cherezov, V., GPCR, GPCR.Network.
compound source
symmetry
R_factor
R_Free 0.2742
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
ligand ZD7 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the Angiotensin receptor revealed by serial femtosecond crystallography., Zhang H, Unal H, Gati C, Han GW, Liu W, Zatsepin NA, James D, Wang D, Nelson G, Weierstall U, Sawaya MR, Xu Q, Messerschmidt M, Williams GJ, Boutet S, Yefanov OM, White TA, Wang C, Ishchenko A, Tirupula KC, Desnoyer R, Coe J, Conrad CE, Fromme P, Stevens RC, Katritch V, Karnik SS, Cherezov V, Cell. 2015 May 7;161(4):833-44. doi: 10.1016/j.cell.2015.04.011. Epub 2015 Apr, 23. PMID:25913193
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk]
  • Biological Unit Coordinates (4yay.pdb1.gz) 131 Kb
  • LPC: Ligand-Protein Contacts for 4YAY
  • CSU: Contacts of Structural Units for 4YAY
  • Structure Factors (276 Kb)
  • Retrieve 4YAY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YAY from S2C, [Save to disk]
  • Re-refined 4yay structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YAY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4YAY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4YAY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yay] [4yay_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4YAY
  • Community annotation for 4YAY at PDBWiki (http://pdbwiki.org)

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