4YBQ Rat GLUT5 with Fv in the outward-open form date
authors Nomura, N., Shimamura, T., Iwata, S.
compound source
symmetry
R_factor
R_Free 0.2881
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.27
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (467 Kb) [Save to disk]
  • Biological Unit Coordinates (4ybq.pdb1.gz) 230 Kb
  • Biological Unit Coordinates (4ybq.pdb2.gz) 234 Kb
  • CSU: Contacts of Structural Units for 4YBQ
  • Structure Factors (328 Kb)
  • Retrieve 4YBQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YBQ from S2C, [Save to disk]
  • Re-refined 4ybq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YBQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4YBQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ybq_C] [4ybq_F] [4ybq] [4ybq_B] [4ybq_A] [4ybq_D] [4ybq_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4YBQ: [IGv ] by SMART
    • Other resources with information on 4YBQ
  • Community annotation for 4YBQ at PDBWiki (http://pdbwiki.org)

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