4YFF TNNI3K complexed with inhibitor 2 date
authors Shewchuk, L.M., Wang, L., Lawhorn, B.G.
compound source
symmetry
R_factor
R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.07
ligand 4CV enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceIdentification of Purines and 7-Deazapurines as Potent and Selective Type I Inhibitors of Troponin I-Interacting Kinase (TNNI3K)., Lawhorn BG, Philp J, Zhao Y, Louer C, Hammond M, Cheung M, Fries H, Graves AP, Shewchuk L, Wang L, Cottom JE, Qi H, Zhao H, Totoritis R, Zhang G, Schwartz B, Li H, Sweitzer S, Holt DA, Gatto GJ Jr, Kallander LS, J Med Chem. 2015 Sep 24;58(18):7431-48. doi: 10.1021/acs.jmedchem.5b00931. Epub, 2015 Sep 10. PMID:26355916
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (343 Kb) [Save to disk]
  • Biological Unit Coordinates (4yff.pdb1.gz) 170 Kb
  • Biological Unit Coordinates (4yff.pdb2.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 4YFF
  • CSU: Contacts of Structural Units for 4YFF
  • Structure Factors (573 Kb)
  • Retrieve 4YFF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YFF from S2C, [Save to disk]
  • Re-refined 4yff structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YFF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4YFF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yff_A] [4yff_B] [4yff_D] [4yff] [4yff_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4YFF: [STYKc ] by SMART
  • Other resources with information on 4YFF
  • Community annotation for 4YFF at PDBWiki (http://pdbwiki.org)

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