4YXI Human Carbonic Anhydrase II complexed with an inhibitor with a benzenesulfonamide group (2). date
authors Rechlin, C., Heine, A., Klebe, G.
compound source
symmetry
R_factor
R_Free 0.1533
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 0.96
ligand 4J8, GOL, MBO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceKinetic and Structural Insights into the Mechanism of Binding of Sulfonamides to Human Carbonic Anhydrase by Computational and Experimental Studies., Gaspari R, Rechlin C, Heine A, Bottegoni G, Rocchia W, Schwarz D, Bomke J, Gerber HD, Klebe G, Cavalli A, J Med Chem. 2016 Jan 12. PMID:26700575
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (4yxi.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 4YXI
  • CSU: Contacts of Structural Units for 4YXI
  • Structure Factors (1228 Kb)
  • Retrieve 4YXI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YXI from S2C, [Save to disk]
  • Re-refined 4yxi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YXI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4YXI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yxi_A] [4yxi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4YXI: [Carb_anhydrase ] by SMART
    • Other resources with information on 4YXI
  • Community annotation for 4YXI at PDBWiki (http://pdbwiki.org)

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