4ZAE Development of a novel class of potent and selective FIXa inhibitors date
authors Hruza, A., Reichert, P.
compound source
symmetry
R_factor
R_Free 0.1741
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.86
ligand 4M1, NA, NHE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceDevelopment of a novel class of potent and selective FIXa inhibitors., Zhang T, Andre P, Bateman TJ, Chen YH, Desai K, Ellsworth K, Geissler WM, Guo L, Hruza A, Jian T, Meng D, Parker DL Jr, Qian X, Reichert P, Sherer EC, Shu M, Smith CJ, Sonatore LM, Tschirret-Guth R, Nolting AF, Orr R, Campeau LC, Araki K, Nishimura T, Sakurada I, Wood HB, Bioorg Med Chem Lett. 2015 Apr 29. pii: S0960-894X(15)00389-3. doi:, 10.1016/j.bmcl.2015.04.057. PMID:25978966
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (4zae.pdb1.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 4ZAE
  • CSU: Contacts of Structural Units for 4ZAE
  • Structure Factors (745 Kb)
  • Retrieve 4ZAE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZAE from S2C, [Save to disk]
  • Re-refined 4zae structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZAE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZAE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ZAE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zae] [4zae_B] [4zae_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4ZAE: [EGF] [Tryp_SPc ] by SMART
  • Other resources with information on 4ZAE
  • Community annotation for 4ZAE at PDBWiki (http://pdbwiki.org)

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