4ZBW Crystal structure of death effector domain of Caspase8 in Homo Sapiens date
authors Shen, C., Wang, T., Quan, J.
compound source
symmetry
R_factor
R_Free 0.2510
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the death effector domains of caspase-8., Shen C, Yue H, Pei J, Guo X, Wang T, Quan JM, Biochem Biophys Res Commun. 2015 Jul 31;463(3):297-302. doi:, 10.1016/j.bbrc.2015.05.054. Epub 2015 May 20. PMID:26003730
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk]
  • Biological Unit Coordinates (4zbw.pdb1.gz) 129 Kb
  • CSU: Contacts of Structural Units for 4ZBW
  • Structure Factors (424 Kb)
  • Retrieve 4ZBW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZBW from S2C, [Save to disk]
  • Re-refined 4zbw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZBW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZBW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zbw] [4zbw_B] [4zbw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZBW: [DED ] by SMART
  • Other resources with information on 4ZBW
  • Community annotation for 4ZBW at PDBWiki (http://pdbwiki.org)

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