4ZGY STRUCTURE of HUMAN ORNITHINE DECARBOXYLASE IN COMPLEX WITH A C-TERMINAL FRAGMENT OF ANTIZYME date
authors Wu, H.Y., Chan, N.L.
compound source
symmetry
R_factor
R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.63
ligand MG, PLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructural basis of antizyme-mediated regulation of polyamine homeostasis., Wu HY, Chen SF, Hsieh JY, Chou F, Wang YH, Lin WT, Lee PY, Yu YJ, Lin LY, Lin TS, Lin CL, Liu GY, Tzeng SR, Hung HC, Chan NL, Proc Natl Acad Sci U S A. 2015 Sep 8;112(36):11229-34. doi:, 10.1073/pnas.1508187112. Epub 2015 Aug 24. PMID:26305948
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (4zgy.pdb1.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 4ZGY
  • CSU: Contacts of Structural Units for 4ZGY
  • Structure Factors (297 Kb)
  • Retrieve 4ZGY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZGY from S2C, [Save to disk]
  • Re-refined 4zgy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZGY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZGY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zgy_A] [4zgy_B] [4zgy]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZGY
  • Community annotation for 4ZGY at PDBWiki (http://pdbwiki.org)

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