4ZNV Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in complex with a 2-Methoxy-substituted OBHS derivative date
authors Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
compound source
symmetry
R_factor
R_Free 0.1969
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.77
ligand 4Q7 enzyme
Primary referencePredictive features of ligand-specific signaling through the estrogen receptor., Nwachukwu JC, Srinivasan S, Zheng Y, Wang S, Min J, Dong C, Liao Z, Nowak J, Wright NJ, Houtman R, Carlson KE, Josan JS, Elemento O, Katzenellenbogen JA, Zhou HB, Nettles KW, Mol Syst Biol. 2016 Apr 22;12(4):864. doi: 10.15252/msb.20156701. PMID:27107013
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk]
  • Biological Unit Coordinates (4znv.pdb1.gz) 169 Kb
  • LPC: Ligand-Protein Contacts for 4ZNV
  • CSU: Contacts of Structural Units for 4ZNV
  • Structure Factors (436 Kb)
  • Retrieve 4ZNV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZNV from S2C, [Save to disk]
  • Re-refined 4znv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZNV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZNV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4znv_A] [4znv_C] [4znv_D] [4znv_B] [4znv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZNV: [HOLI ] by SMART
    • Other resources with information on 4ZNV
  • Community annotation for 4ZNV at PDBWiki (http://pdbwiki.org)

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