4ZV8 Structure of CYP2B6 (Y226H/K262R) with additional mutation Y244W in complex with alpha-Pinene date
authors Liu, J., Shah, M.B., Stout, C.D., Halpert, J.R.
compound source
symmetry
R_factor
R_Free 0.23218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.24
ligand CM5, HEM, TMH enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCoumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations., Liu J, Shah MB, Zhang Q, Stout CD, Halpert JR, Wilderman PR, Biochemistry. 2016 Apr 5;55(13):1997-2007. doi: 10.1021/acs.biochem.5b01330. Epub, 2016 Mar 24. PMID:26982502
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (4zv8.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 4ZV8
  • CSU: Contacts of Structural Units for 4ZV8
  • Structure Factors (624 Kb)
  • Retrieve 4ZV8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZV8 from S2C, [Save to disk]
  • Re-refined 4zv8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZV8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZV8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zv8_A] [4zv8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZV8
  • Community annotation for 4ZV8 at PDBWiki (http://pdbwiki.org)

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