4ZVR Caspase-7 Variant 4 (V4) with reprogrammed substrate specificity due to Y230V/W232Y/S234V/Q276D substitutions bound to DEVD inhibitor. date
authors Hill, M.E., MacPherson, D.J., Hardy, J.A.
compound source
symmetry
R_factor
R_Free 0.2239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand ACE, ASJ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Primary referenceReprogramming Caspase-7 Specificity by Regio-Specific Mutations and Selection Provides Alternate Solutions for Substrate Recognition., Hill ME, MacPherson DJ, Wu P, Julien O, Wells JA, Hardy JA, ACS Chem Biol. 2016 Mar 31. PMID:27032039
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (4zvr.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 4ZVR
  • CSU: Contacts of Structural Units for 4ZVR
  • Structure Factors (695 Kb)
  • Retrieve 4ZVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZVR from S2C, [Save to disk]
  • Re-refined 4zvr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZVR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zvr_C] [4zvr_A] [4zvr_F] [4zvr_B] [4zvr_E] [4zvr] [4zvr_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZVR: [CASc ] by SMART
    • Other resources with information on 4ZVR
  • Community annotation for 4ZVR at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science