4ZYF Discovery of NVP-CGM097 - a highly potent and selective MDM2 inhibitor undergoing phase 1 clinical trials in p53wt tumors: Hdm2 (MDM2) complexed with NVP-CGM097 date
authors Kallen, J.
compound source
symmetry
R_factor
R_Free 0.2321
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand 4T4, CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of a dihydroisoquinolinone derivative (NVP-CGM097) - a highly potent and selective MDM2 inhibitor undergoing phase 1 clinical trials in p53wt tumors., Holzer P, Masuya K, Furet P, Kallen J, Valat-Stachyra T, Ferretti S, Berghausen J, Bouisset-Leonard M, Buschmann N, Pissot-Soldermann C, Rynn C, Ruetz S, Stutz S, Chene P, Jeay S, Gessier F, J Med Chem. 2015 Jul 16. PMID:26181851
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (4zyf.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 4ZYF
  • CSU: Contacts of Structural Units for 4ZYF
  • Structure Factors (174 Kb)
  • Retrieve 4ZYF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZYF from S2C, [Save to disk]
  • Re-refined 4zyf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZYF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZYF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zyf_A] [4zyf]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZYF
  • Community annotation for 4ZYF at PDBWiki (http://pdbwiki.org)

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