4ZZH SIRT1/Activator Complex date
authors Dai, H.
compound source
symmetry
R_factor
R_Free 0.2381
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.10
ligand 4TO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystallographic structure of a small molecule SIRT1 activator-enzyme complex., Dai H, Case AW, Riera TV, Considine T, Lee JE, Hamuro Y, Zhao H, Jiang Y, Sweitzer SM, Pietrak B, Schwartz B, Blum CA, Disch JS, Caldwell R, Szczepankiewicz B, Oalmann C, Yee Ng P, White BH, Casaubon R, Narayan R, Koppetsch K, Bourbonais F, Wu B, Wang J, Qian D, Jiang F, Mao C, Wang M, Hu E, Wu JC, Perni RB, Vlasuk GP, Ellis JL, Nat Commun. 2015 Jul 2;6:7645. doi: 10.1038/ncomms8645. PMID:26134520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk]
  • Biological Unit Coordinates (4zzh.pdb1.gz) 231 Kb
  • LPC: Ligand-Protein Contacts for 4ZZH
  • CSU: Contacts of Structural Units for 4ZZH
  • Structure Factors (232 Kb)
  • Retrieve 4ZZH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZZH from S2C, [Save to disk]
  • Re-refined 4zzh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZZH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZZH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zzh] [4zzh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZZH
  • Community annotation for 4ZZH at PDBWiki (http://pdbwiki.org)

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