5AA8 Structure of C1156Y,L1198F Mutant Human Anaplastic Lymphoma Kinase in Complex with PF-06463922 ((10R)-7-amino-12-fluoro-2,10,16-trimethyl- 15-oxo-10,15,16,17-tetrahydro-2H-8,4-(metheno)pyrazolo(4,3-h)(2,5,11) benzoxadiazacyclotetradecine-3-carbonitrile). date
authors McTigue, M., Deng, Y.L., Liu, W., Brooun, A., Stewart, A.
compound source
symmetry
R_factor
R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.86
ligand 5P8 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (5aa8.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 5AA8
  • CSU: Contacts of Structural Units for 5AA8
  • Structure Factors (207 Kb)
  • Retrieve 5AA8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AA8 from S2C, [Save to disk]
  • Re-refined 5aa8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AA8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5AA8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aa8_A] [5aa8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5AA8: [TyrKc ] by SMART
    • Other resources with information on 5AA8
  • Community annotation for 5AA8 at PDBWiki (http://pdbwiki.org)

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