5AEF	Electron cryo-microscopy of an Abeta(1-42)amyloid fibril	date
authors	Schmidt, M., Rohou, A., Lasker, K., Yadav, J.K., Schiene-Fischer, C., Fandrich, M., Grigorieff, N.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	5.00
Gene Ontology	Chain Function Process Component A, B
Primary reference	Peptide dimer structure in an Abeta(1-42) fibril visualized with cryo-EM., Schmidt M, Rohou A, Lasker K, Yadav JK, Schiene-Fischer C, Fandrich M, Grigorieff N, Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):11858-63. doi:, 10.1073/pnas.1503455112. Epub 2015 Sep 8. PMID:26351699

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk] Biological Unit Coordinates (5aef.pdb1.gz) 18 Kb CSU: Contacts of Structural Units for 5AEF Retrieve 5AEF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5AEF from S2C, [Save to disk]

View 5AEF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5AEF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5aef_B] [5aef_A] [5aef] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5AEF

Community annotation for 5AEF at PDBWiki (http://pdbwiki.org)

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