5AP3 Transferase date Sep 14, 2015
title Naturally Occurring Mutations In The Mps1 Gene Predispose Ce Kinase Inhibitor Drug Resistance.
authors M.D.Gurden, I.M.Westwood, A.Faisal, S.Naud, K.J.Cheung, C.Mcandre J.Schmitt, K.Boxall, G.Mak, P.Workman, R.Burke, S.Hoelder, J.Blag R.L.M.Van Montfort, S.Linardopoulos
compound source
Molecule: Dual Specificity Protein Kinase Ttk
Chain: A
Fragment: Kinase Domain, Unp Residues 519-808
Synonym: Phosphotyrosine Picked Threonine-Protein Kinase, P Monopolar Spindle Kinase 1;
Ec: 2.7.12.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_variant: Ai
symmetry Space Group: I 2 2 2
R_factor 0.190 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.730 111.250 112.010 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand 7PE, AU5, DMS, EDO, TPO enzyme Transferase E.C.2.7.12.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (5ap3.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 5AP3
  • CSU: Contacts of Structural Units for 5AP3
  • Structure Factors (633 Kb)
  • Retrieve 5AP3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AP3 from S2C, [Save to disk]
  • Re-refined 5ap3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5AP3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5AP3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ap3_A] [5ap3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5AP3: [S_TKc ] by SMART
  • Other resources with information on 5AP3
  • Community annotation for 5AP3 at PDBWiki (http://pdbwiki.org)

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