5AWL De Novo Protein date Jul 05, 2015
title Crystal Structure Of A Mutant Of Chignolin, Cln025
authors T.Akiba, M.Ishimura, T.Odahara, K.Harata, S.Honda
compound source
Molecule: A Mutant Of Chignolin, Cln025
Chain: A
Engineered: Yes
Mutation: Yes
 Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 21 21 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
19.246 33.597 11.551 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.11 Å
Primary referenceCrystal structure of a ten-amino acid protein., Honda S, Akiba T, Kato YS, Sawada Y, Sekijima M, Ishimura M, Ooishi A, Watanabe H, Odahara T, Harata K, J Am Chem Soc. 2008 Nov 19;130(46):15327-31. doi: 10.1021/ja8030533. Epub 2008, Oct 25. PMID:18950166
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (8 Kb) [Save to disk]
  • Biological Unit Coordinates (5awl.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 5AWL
  • Structure Factors (73 Kb)
  • Retrieve 5AWL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AWL from S2C, [Save to disk]
  • Re-refined 5awl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AWL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5AWL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5awl] [5awl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5AWL
  • Community annotation for 5AWL at PDBWiki (http://pdbwiki.org)

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