5AWW	Protein Transport Immune System	date	Jul 10, 2015
title	Precise Resting State Of Thermus Thermophilus Secyeg
authors	Y.Tanaka, Y.Sugano, M.Takemoto, T.Kusakizako, K.Kumazaki, R.Ishit O.Nureki, T.Tsukazaki
compound		source
Molecule: Protein Translocase Subunit Secy Chain: Y Engineered: Yes Mutation: Yes		Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 Gene: Secy, Ttha1672 Expression_system: Escherichia Coli Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768
Molecule: Protein Translocase Subunit Sece Chain: E Engineered: Yes		Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 Gene: Sece, Ttha0249 Expression_system: Escherichia Coli Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768
Molecule: Putative Preprotein Translocase, Secg Subunit Chain: G Fragment: Unp Residues 43-116 Engineered: Yes		Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 Gene: Ttha1784 Expression_system: Escherichia Coli Bl21-Gold(De3)Plyss Ag Expression_system_taxid: 866768
symmetry	Space Group: I 2 2 2	R_factor 0.219 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.493 112.904 140.002 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.72 Å
ligand	OLC	enzyme
Gene Ontology	Chain Function Process Component E G Y
Primary reference	Crystal Structures of SecYEG in Lipidic Cubic Phase Elucidate a Precise Resting and a Peptide-Bound State., Tanaka Y, Sugano Y, Takemoto M, Mori T, Furukawa A, Kusakizako T, Kumazaki K, Kashima A, Ishitani R, Sugita Y, Nureki O, Tsukazaki T, Cell Rep. 2015 Nov 24;13(8):1561-8. doi: 10.1016/j.celrep.2015.10.025. Epub 2015 , Nov 12. PMID:26586438

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk] Biological Unit Coordinates (5aww.pdb1.gz) 91 Kb LPC: Ligand-Protein Contacts for 5AWW CSU: Contacts of Structural Units for 5AWW Structure Factors (162 Kb) Retrieve 5AWW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5AWW from S2C, [Save to disk] Re-refined 5aww structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5AWW in 3D

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Visual 3D analysis of 5AWW

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5aww_Y] [5aww_G] [5aww] [5aww_E] SWISS-PROT database: Domain organization of by SWISSPFAM

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