5AZB	Transferase	date	Sep 30, 2015
title	Crystal Structure Of Escherichia Coli Lgt In Complex With Phosphatidylglycerol And The Inhibitor Palmitic Acid
authors	X.C.Zhang, G.Mao, Y.Zhao
compound		source
Molecule: Prolipoprotein Diacylglyceryl Transferase Chain: A Fragment: Unp Residues 2-291 Ec: 2.4.99.- Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 83333 Strain: K12 Gene: Lgt, Umpa, B2828, Jw2796 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.179 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.413 60.973 117.720 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	BOG, PGT, PLM	enzyme	Transferase E.C.2.4.99 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of E. coli lipoprotein diacylglyceryl transferase., Mao G, Zhao Y, Kang X, Li Z, Zhang Y, Wang X, Sun F, Sankaran K, Zhang XC, Nat Commun. 2016 Jan 5;7:10198. doi: 10.1038/ncomms10198. PMID:26729647

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (5azb.pdb1.gz) 103 Kb LPC: Ligand-Protein Contacts for 5AZB CSU: Contacts of Structural Units for 5AZB Structure Factors (484 Kb) Retrieve 5AZB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5AZB from S2C, [Save to disk] Re-refined 5azb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5AZB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5AZB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5azb_A] [5azb] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5AZB

Community annotation for 5AZB at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---