5B57 Metal Transport date Apr 25, 2016
title Inward-Facing Conformation Of Abc Heme Importer Bhuuv From Burkholderia Cenocepacia
authors Y.Naoe, N.Nakamura, A.Doi, Y.Shiro, H.Sugimoto
compound source
Molecule: Putative Hemin Abc Transport System, Membrane Pro
Chain: A, B
Synonym: Heme Importer Transmembrane Subunit Bhuu
Engineered: Yes
Organism_scientific: Burkholderia Cenocepacia J2315
Organism_taxid: 216591
Strain: J2315
Gene: Hmuu, Bcam2629
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-19b

Molecule: Hemin Import Atp-Binding Protein Hmuv
Chain: C, D
Synonym: Heme Importer Atp-Binding Subunit Bhuv
Ec: 3.6.3.-
Engineered: Yes

Organism_scientific: Burkholderia Cenocepacia J2315
Organism_taxid: 216591
Strain: J2315
Gene: Hmuv, Bcam2630
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: C41(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-19b
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.824 118.283 142.747 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand DMU, SO4 enzyme Hydrolase E.C.3.6.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • transmembrane transporter ac...


  • D, C
  • heme-transporting ATPase act...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (363 Kb) [Save to disk]
  • Biological Unit Coordinates (5b57.pdb1.gz) 352 Kb
  • LPC: Ligand-Protein Contacts for 5B57
  • CSU: Contacts of Structural Units for 5B57
  • Structure Factors (678 Kb)
  • Retrieve 5B57 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5B57 from S2C, [Save to disk]
  • Re-refined 5b57 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5B57
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5b57_C] [5b57_A] [5b57_B] [5b57_D] [5b57]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5B57: [AAA ] by SMART
  • Other resources with information on 5B57
  • Community annotation for 5B57 at PDBWiki (http://pdbwiki.org)

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